PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004496523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | S1Fa-like | ||||||||
Protein Properties | Length: 727aa MW: 79660.5 Da PI: 6.7775 | ||||||||
Description | S1Fa-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | S1FA | 25 | 3.8e-08 | 306 | 342 | 5 | 41 |
S1FA 5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqk 41 +kGlnPGli+++ v+ + v l+g i+yvy +k XP_004496523.1 306 SNRSKGLNPGLIIVISVADAVGVALIGLVIVYVYWKK 342 5678******************************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08263 | 7.5E-9 | 24 | 63 | IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
Gene3D | G3DSA:3.80.10.10 | 2.9E-56 | 25 | 265 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 9.07E-45 | 29 | 284 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Pfam | PF04689 | 2.9E-5 | 308 | 343 | IPR006779 | DNA binding protein S1FA |
SMART | SM00220 | 1.1E-11 | 421 | 725 | IPR000719 | Protein kinase domain |
PROSITE profile | PS50011 | 31.665 | 421 | 725 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 6.1E-32 | 426 | 643 | IPR000719 | Protein kinase domain |
SuperFamily | SSF56112 | 4.59E-56 | 426 | 722 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:3.30.200.20 | 8.4E-13 | 427 | 483 | No hit | No description |
CDD | cd14066 | 1.54E-84 | 427 | 725 | No hit | No description |
Gene3D | G3DSA:1.10.510.10 | 1.1E-33 | 484 | 656 | No hit | No description |
PROSITE pattern | PS00108 | 0 | 544 | 556 | IPR008271 | Serine/threonine-protein kinase, active site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 727 aa Download sequence Send to blast |
MTLILLCLFP LCFQLFFNFA LSLSSDGLAL LSLKFAVDQS EDGFFSDWNG GDSNPCGWSG 60 ISCGNISGIP EPRVVGIALA GKSLRGYIPS ELGTLRYLRR LNLHDNEFYG VVPMQLFKAT 120 ALHSIFLHRN NLSGPFPPSA CTVPRLQNLD ISDNFFSGNI PNDIKKCKQL QRLLLARNKF 180 SGEIPSGVWS ELDNLVQLDL SANDFKGSIP DDIGNLVSLS GTLNLSFNHL SDQIPNSLGK 240 LPATVSFDLR NNNLIGEIPQ TGTFSNQGPT AFLGNKDLCG FPLRKSCTGS NRDSGSSSSS 300 HKDEQSNRSK GLNPGLIIVI SVADAVGVAL IGLVIVYVYW KKKDNDNVGS CNRKRRFGDE 360 DEDEDEKGNG CSLLPCISGL NLKNEEDNEN GEVEIDKGGK GEGELVTIDK GLKIELDELL 420 RASTYVLGKS ELGIVYKVVL GNGGPVVVRR LGEGGEERYK EFVAEVQAIG KVKHPNIVRL 480 RAYYWAHDEK LLISDFISNG NLAHALRGRN GQPSSNLSWS TRLRIAKGIA RGLSYLHECS 540 PRKYVHGDIK PSNILLDNDL QPYISDFGLN RLISITGNNP STGGFMGGAL PYMKSSYKEN 600 RTNNNNYKAP EAHVPGCRPT QKWDVYSLGV VMLELLTGKS PESSPMSLSL SSSVSVVEGY 660 ELVRWVRNGF DQQSPLSEMV DPSLLQEVRA KKEVLAVFHV ALACTEGDPE VRPRMKIVFE 720 NLEKIGR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4oh4_A | 1e-41 | 402 | 725 | 19 | 319 | Protein BRASSINOSTEROID INSENSITIVE 1 |
4oh4_B | 1e-41 | 402 | 725 | 19 | 319 | Protein BRASSINOSTEROID INSENSITIVE 1 |
4q5j_A | 1e-41 | 402 | 725 | 19 | 319 | Protein BRASSINOSTEROID INSENSITIVE 1 |
4q5j_B | 1e-41 | 402 | 725 | 19 | 319 | Protein BRASSINOSTEROID INSENSITIVE 1 |
5lpb_A | 7e-42 | 413 | 725 | 6 | 294 | Protein BRASSINOSTEROID INSENSITIVE 1 |
5lpv_A | 7e-42 | 413 | 725 | 6 | 294 | Protein BRASSINOSTEROID INSENSITIVE 1 |
5lpw_A | 7e-42 | 413 | 725 | 6 | 294 | Protein BRASSINOSTEROID INSENSITIVE 1 |
5lpy_A | 7e-42 | 413 | 725 | 6 | 294 | Protein BRASSINOSTEROID INSENSITIVE 1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 340 | 355 | KKKDNDNVGSCNRKRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004496523.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004496523.1 | 0.0 | receptor protein kinase-like protein ZAR1 | ||||
TrEMBL | A0A1S2XYL5 | 0.0 | A0A1S2XYL5_CICAR; receptor protein kinase-like protein ZAR1 | ||||
STRING | XP_004496523.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5400 | 5 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12020.2 | 9e-11 | WRKY family protein |