PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496019.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family GeBP
Protein Properties Length: 351aa    MW: 40332.4 Da    PI: 4.5198
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57383.43.2e-26111208297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                     + qrlw+++De+ lL+G  d+ +++g      ++d+  fy+ + ++ s++++++qlveK+rrLK+K k+  +k  ++ ++sf+ +hdq if++s+
  XP_004496019.1 111 QYQRLWTKQDEMELLKGYFDYIKQQGRtntTLQSDVASFYNHIMHKFSADFNRNQLVEKLRRLKRKHKMALDK-GKEVHVSFKIPHDQAIFDISH 204
                     579******************9998876534556***************************************.667778*************** PP

          DUF573  94 kiWg 97 
                     kiWg
  XP_004496019.1 205 KIWG 208
                     ***8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.0E-25113208IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MLSPLVSWIL SPSSSSSSSS EEENIDINND ESDHENFQND HQMDNVDDED KDRFLSPYDV  60
DGTISDASPA VTLALPASTD DTNTVSTADD TTIETRSKPQ RNYKYSGGLR QYQRLWTKQD  120
EMELLKGYFD YIKQQGRTNT TLQSDVASFY NHIMHKFSAD FNRNQLVEKL RRLKRKHKMA  180
LDKGKEVHVS FKIPHDQAIF DISHKIWGND TYHDVLDVDE SKPVSESLDL IDNVKMKNEH  240
VDNCDETDKR EHKRVRLTTD DVNTENDNND DATSIQGFIE ETMKSCFSPL LKELLDDAPE  300
EPLGELPSSG EVRDEQWLKR KILELEVYSN RLELLQGQIK ARLEELRSGL G
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004496019.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496019.10.0probable transcription factor At5g28040
TrEMBLA0A1S2XXI90.0A0A1S2XXI9_CICAR; probable transcription factor At5g28040
STRINGXP_004496019.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1630579
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.14e-42DNA-binding storekeeper protein-related transcriptional regulator