PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004494993.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 162aa    MW: 18548.3 Da    PI: 10.1501
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004494993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000833860123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ Fs+   L  H  +H
  XP_004494993.1 38 FECKTCNRKFSSFQALGGHRASH 60
                    89**********99999998887 PP
2zf-C2H214.78.6e-0583105123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg+ F+    L  H+r+H
  XP_004494993.1  83 HECSICGQEFKLGQALGGHMRRH 105
                     78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.183865IPR007087Zinc finger, C2H2
SMARTSM003550.193860IPR015880Zinc finger, C2H2-like
SuperFamilySSF576676.29E-838105No hitNo description
PfamPF139127.2E-113862IPR007087Zinc finger, C2H2
PROSITE patternPS0002804060IPR007087Zinc finger, C2H2
SMARTSM003550.07183105IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.49283110IPR007087Zinc finger, C2H2
PfamPF139122.7E-983106IPR007087Zinc finger, C2H2
PROSITE patternPS00028085105IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0071289Biological Processcellular response to nickel ion
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MMKRQRETEE KESIDLATSL MLLSRTQQNK TFSSPIEFEC KTCNRKFSSF QALGGHRASH  60
KKLKIEGQQE SLKGNNNNVK KMHECSICGQ EFKLGQALGG HMRRHRNNEA FSNCFEKSSP  120
VLKRSNSKRV MCLELDLNLT PLENDLKLLF GNKAPRVDLS LF
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004494993.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004494993.11e-115zinc finger protein ZAT11
SwissprotQ9SLD41e-44ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A1S2XWE81e-114A0A1S2XWE8_CICAR; zinc finger protein ZAT11
STRINGXP_004494993.11e-115(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.14e-47C2H2 family protein