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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_004494832.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
bHLH |
| Protein Properties |
Length: 579aa MW: 64582.9 Da PI: 6.6863 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004494832.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 40.6 | 4.7e-13 | 408 | 454 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq
XP_004494832.1 408 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 454
799***********************66......******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 579 aa
Download sequence Send
to blast |
MKVKEVASTL RFLLLNEEDK SMVGAVLGSQ AFDFLTTNCL SNEPVLLSIA TSDDSLQNKL 60
SDLVENPNYS TNFNWNYAIF WQLSRSKSGE IVLGWGDGCC REPNEEEKRG GVGNNSNLSM 120
EEEEGMKQSL RKRVLQKLHT VFGGSDEDEE NYAFGLDRVT DTEMFFLASM YFSFPKGYGG 180
PGKCFASGKY LWLKKSDISD YCVRSFLAKS AGIQTVVLVP TDFGVVELGS VRMVPESFDL 240
LNTVKSLFPI STSLQSSLYP SRVMHEGRVH ESGVSNGVLV PKVVVNVNNG RTHFREKLAF 300
RKMDNSINFP SGRNGFHDSS WRLNQGQPEI FTPNGVRKDF RLNQPQREVQ MQIDFSGANS 360
RPSVRPVNAE LELTVDVEAS VKEDQASDER RPRKRGRKPA NGRDEPLNHV EAERQRREKL 420
NQRFYALRAV VPNISKMDKA SLLGDAIAYI NELQAKLGIM ESERVTNGIS PLKDGSILEA 480
NSRSENRHQQ DVVIQALQDE VIVKVSCPLD IHPVSKVIET FKEAQISVVE SKLAAANDTI 540
HHTFVIKSQG SEQLTKDKLI AAFSKESNAS QIQTLSSVG
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5gnj_A | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_B | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_E | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_F | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_G | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_I | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_M | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| 5gnj_N | 8e-30 | 402 | 465 | 2 | 65 | Transcription factor MYC2 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 389 | 397 | RRPRKRGRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |
