PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004494476.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 398aa    MW: 43906.8 Da    PI: 8.1628
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004494476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.59e-31196254259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++v+++tYeg+Hnh+
  XP_004494476.1 196 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTVLITTYEGKHNHP 254
                     7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-34180256IPR003657WRKY domain
SuperFamilySSF1182905.62E-28188256IPR003657WRKY domain
PROSITE profilePS5081130.136190256IPR003657WRKY domain
SMARTSM007749.1E-37195255IPR003657WRKY domain
PfamPF031061.2E-26197254IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MENCNRELSF LTSNEFLRNN TDPPPIKEMD FFSSPSNTII KQRSPTVLLP PHSVNTGLNL  60
KCASAEVSKE ENPETELSRV EKELRRVQEE NQKLRVVLEQ ITKSYSQLQA QLFIAMHKQN  120
PHQNMADIKI DVNDASVSDE KQACSNHHPA KEEVSERSSS NTISKLEEHS KTSDQEPPFR  180
KARVSVRARS EAPMISDGCQ WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR KQVQRCAEDK  240
TVLITTYEGK HNHPLPPAAT AMANTTSAAA AMLLSGSTLT KEYSTLPYLS SFIPYPTMPT  300
LSPSQPFPTI TLDLTHQNIL PLPLQGHPLF FSHKLPPPMA LPPSSLVDNV SAAISSDPNF  360
TAALTAAISS IINGPQRGSV LPGSPQLHSQ SCTTYSTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-22186256877Probable WRKY transcription factor 4
2lex_A2e-22186256877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00115ampDAPTransfer from AT4G01720Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004494476.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004494476.10.0probable WRKY transcription factor 47 isoform X1
SwissprotQ9ZSI72e-82WRK47_ARATH; Probable WRKY transcription factor 47
TrEMBLA0A1S2XV920.0A0A1S2XV92_CICAR; probable WRKY transcription factor 47 isoform X1
STRINGXP_004494476.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.14e-73WRKY family protein