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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004494428.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
WRKY |
Protein Properties |
Length: 248aa MW: 28508.8 Da PI: 6.1124 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004494428.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.9 | 1.2e-29 | 56 | 113 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D +WrKYGqK++kgs++pr+YYrC+ + gC++kk+vers++d ++++itY+++Hnh+
XP_004494428.1 56 DFGSWRKYGQKPIKGSPYPRGYYRCSASkGCSAKKQVERSSTDSSMLIITYTSTHNHP 113
5668**********************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MDNINDSPQH ESEPSNLELK PESQASKKRK MVEKRVVRVR VGENVSKLKN EGLPTDFGSW 60 RKYGQKPIKG SPYPRGYYRC SASKGCSAKK QVERSSTDSS MLIITYTSTH NHPDPTTLLQ 120 QPKQSKTKTI EEQEHIEEEM INSNNNKNKN KSTITNDQMT NEENYHYLQS PIDQEDPFKL 180 HTEINHADKI DILLEEEPLC YAKLKNLSAS KSEELDFFDE LEELPMSSSF LHFTRSIFSD 240 ERIPVAPS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT140431 | 1e-100 | BT140431.1 Medicago truncatula clone JCVI-FLMt-17K15 unknown mRNA. |