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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_004494224.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
B3 |
Protein Properties |
Length: 277aa MW: 31998.2 Da PI: 6.9522 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004494224.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 101.7 | 4.2e-32 | 45 | 146 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91
f+k ltpsdv+k++rlv+pk++ae++ ++++ ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F+++ r ++
XP_004494224.1 45 FEKPLTPSDVGKLNRLVIPKQHAERYfplDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFHRH-RfCPKR 138
99**************************9777778999************************************************75.559999 PP
.EEEEE-S CS
B3 92 lvvkvfrk 99
++++++r+
XP_004494224.1 139 FFISWRRR 146
99999998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MSKTTLWWSQ EKQQDEEENE NENENDVVLE ETNTATQEEE KEAMFEKPLT PSDVGKLNRL 60 VIPKQHAERY FPLDSEEIKG LLLSFEDESG KCWRFRYSYW NSSQSYVLTK GWSRYVKDKR 120 LDAGDVVLFH RHRFCPKRFF ISWRRRNNSF STTPPAHLSD ANGNISLGWS TGFYPAHPYP 180 THHQTVSYHA GGGSQSQSPT TPCGNSSSSS TFRVLRLFGV NVKCQLDNNI NDSETLTPEC 240 SYNMSLAQGT ATPQFYHHRQ PSYNSSPNHH MLRQQPY
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 4e-49 | 40 | 146 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 4e-49 | 40 | 146 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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