PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004494156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 491aa MW: 54460.7 Da PI: 8.4867 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.4 | 6.4e-08 | 137 | 199 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr + NRe+Ar +R++a eeL +k+++L eN+ Lk + e ke+++l++ + XP_004494156.1 137 EKEARRIRRVMANRESARQTIRRRQALSEELSRKAATLVLENENLKRKKELALKEYKSLETTN 199 799*******************************************99999999999998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 1.3E-6 | 137 | 199 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.4E-6 | 137 | 201 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.393 | 139 | 202 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.6E-4 | 141 | 197 | No hit | No description |
CDD | cd14702 | 2.43E-12 | 142 | 192 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence Send to blast |
MESSHTSTSS SSSSSLSLSL SFSSSSSSSS SSASQEIEAA QTLAYLSRLA MHHTTTHSAD 60 KCRTKPITPI PHSDHPPPPG QAIAGQQLEE KLSSTTSVET ERIQQNDCLR NTKIEQDADL 120 PKTIRCNKSR RNLTEEEKEA RRIRRVMANR ESARQTIRRR QALSEELSRK AATLVLENEN 180 LKRKKELALK EYKSLETTNQ LLKAQIAKST NTEAEKTPVE QKLSVAEVAP VHGNSPWFLY 240 NHFPVSQLFW PSILQSSNQI QFQHTPFNSI AIPSHVYVPS RSSESEFCDK QNNLMNDNQT 300 QNPLYMFPCP WLYPPSENGN GQPPASTGLE DKQDNLPLGK QCSTSLSLNR VANGDYPATI 360 PIKLKTEASG WTESRSSNDP GHTTPCFSLD GGEQNTRCHV VENLHGPAVD CNGHASVVKQ 420 EPELQLHFTS NTEVSSAASH IATSTLEKKQ EQFICSGRNL VDAVAAAKAR KRRKQLTKLK 480 SIQSRQSRME C |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004494156.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004494156.1 | 0.0 | uncharacterized protein LOC101502538 isoform X1 | ||||
TrEMBL | A0A1S2XV55 | 0.0 | A0A1S2XV55_CICAR; uncharacterized protein LOC101502538 isoform X1 | ||||
STRING | XP_004494156.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 2e-40 | bZIP family protein |