PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493933.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 458aa    MW: 50985.6 Da    PI: 7.5546
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.7e-32195250359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh 
  XP_004493933.1 195 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSY-DGEIAEIVYKGEHNHA 250
                     9***************************************.***************7 PP
2WRKY102.62.2e-32376433259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+vkg+++prsYYrCt  +C+v+k+ver+ +dpk +++tYeg+Hnhe
  XP_004493933.1 376 GDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPKSFVTTYEGKHNHE 433
                     5********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-30180252IPR003657WRKY domain
PROSITE profilePS5081123.824188252IPR003657WRKY domain
SuperFamilySSF1182909.42E-26191252IPR003657WRKY domain
SMARTSM007748.9E-36193251IPR003657WRKY domain
PfamPF031064.2E-25195249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-33361435IPR003657WRKY domain
PROSITE profilePS5081134.452370435IPR003657WRKY domain
SuperFamilySSF1182904.84E-28371435IPR003657WRKY domain
SMARTSM007741.2E-37375434IPR003657WRKY domain
PfamPF031062.3E-25377433IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MMDIEEAERV VVAKPIASRP TCSTYNSFSE LLAGAVNATP SIASSQTTIS AIRPKTVRFK  60
PAVNLTPAKS IFSQAEFFGG ALSNSTDMDP KPDTNHSLIY KPMAKFVSQT TVSLLANMGI  120
CNTSQQQTQQ SMEDNLQHQN HDKLRANMSS NIHQNTTLPI ETYHATEPCK MTQQNMEEDQ  180
KALTSTTSAD RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSYDGEIAE  240
IVYKGEHNHA KPQLQKRNSG GTQGSGMVSD GMVQDIWNEG RIETQNDSAY HVKATQPNND  300
SALIGHINVG GGSIENSCGL SGECEEGNKG FEAEEDDPRS KRRKNENQSN ETAVSEEGLV  360
EPRIVTQSSA DSEILGDGFR WRKYGQKVVK GNPYPRSYYR CTNIKCNVRK HVERAIDDPK  420
SFVTTYEGKH NHEMPLKNTV TVASEKDSQA SLSKDKPY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-31195435977Probable WRKY transcription factor 4
2lex_A1e-31195435977Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493933.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493933.10.0WRKY transcription factor 44
RefseqXP_012569395.10.0WRKY transcription factor 44
TrEMBLA0A1S2XSQ10.0A0A1S2XSQ1_CICAR; WRKY transcription factor 44
STRINGXP_004493932.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67903450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-101WRKY family protein