PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493767.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 739aa    MW: 82298.4 Da    PI: 6.3938
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.000485646011355
                     HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     R+ i +++ eLrel+P+ a      K s  + Le++++++  Lq
  XP_004493767.1 564 RQLIQDRIKELRELVPSgA------KCSIDSLLERTIKHMLFLQ 601
                     67799************77......7777779999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142152.8E-335166IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088810.544551600IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    Send to blast
MGNNLNQLLR SLCFNTHWNY AIFWKLKHCA PMILTYEDAY YDSLDCFDSS ENKYCQKTLE  60
QIEGGKSSPD ALGLAVAKMS YHAYSLGEGI VGQVAVSGKH RWICGDNQVT SSGLSIDFAD  120
GWQSQFSAGI RTIVVVPVVP LGVVHLGSLI KVNEDIEVVN HIRNIFLTTQ NYSIDHIPSQ  180
IQSSLKIPLS QSDVLEEKLS SDITPACLQN TARTMRNKTV DVLMPLQCSA RNNNTTHSAY  240
WEIGDNIVKH EGPKLCSDMS SILLQSMSCM INVEHQKFGA IKPLSGRECE SEQNLASFSN  300
NLAKNNVGVN DLIHQSEKAK VDSACFPSVF LDADVCESDQ LHYVDTYQKA MLNIARPLDE  360
NSHRHTKNLE FRTEPCDTDA SYTLLKFPAG YELHEALGPA SLKGSKYFDC LAQVNQDMEI  420
VDMPDEINTT QLTSEFPPEH LLEAMVANIC HSNNDVNYSK LSFCRSMQSA MSSGKTPEAS  480
IHNVHTINVE GYSNSMDHPS LVREEKYHCL SSSSGISGMI SSKGVTSKYH SACSEQLERS  540
SEPSKNSKKR ARPGESCRPR PRDRQLIQDR IKELRELVPS GAKCSIDSLL ERTIKHMLFL  600
QGITMHADKL TKFSDTKSKL HHMETDIVGS SSCEQGSSWA VEVGGDLKVH SILVENLSKK  660
GHLLIEMLCE ECSHFLEIAE AIKSLGLKIL KGATKVRDEK IWICFIVEGE NNRNVHSLDV  720
LWPLVQILQS KRCASTITD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493767.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150372e-37AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493767.10.0transcription factor EMB1444-like isoform X1
TrEMBLA0A1S2XS990.0A0A1S2XS99_CICAR; transcription factor EMB1444-like isoform X1
STRINGXP_004493767.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50272022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.11e-133conserved peptide upstream open reading frame 7