PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493559.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 479aa    MW: 54007.3 Da    PI: 8.081
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1377.4e-12186216333
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                     + k  rr+++NReAAr+sR+RKka+i++Le 
  XP_004493559.1 186 DAKTLRRLAQNREAARKSRLRKKAYIQQLES 216
                     67999************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.2E-8181228No hitNo description
SMARTSM003381.7E-4184237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117186228IPR004827Basic-leucine zipper domain
PfamPF001701.5E-8187217IPR004827Basic-leucine zipper domain
CDDcd147083.24E-20188240No hitNo description
SuperFamilySSF579594.22E-7190232No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
PfamPF141447.5E-30279352IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MASSVKNPNQ TTTQLEPLPP PQHRHHQIQH NFHDHNQISF GMMQSSSPPS VPGTYINKDS  60
GAYDLGELDQ ALFLYLNGQT DPSKVQDQKQ MNSTSGMRPP TLNIFPSQPM HVDPSSSNSK  120
TSLELVSLSP QKSGSKRASE PSMELTNPPK QLLASVSDPS KPVKRERNHR KGPTSSSEQE  180
GPKTPDAKTL RRLAQNREAA RKSRLRKKAY IQQLESSRIR LNQMEQELTH ARNQGMFFGG  240
GAIMGGEQGI PISMNSISSD AAMFDVEYGR WLEEHHHLVC ELRAAVQEHL SENELRMFVD  300
KFLTQYDQVM NLKSLVAKAD IFHLVSGMWM TPAERCFMWI GGFKPSELIK VIVGQIEPLS  360
EQQIMGICGL QQSTQEAEEA LSQGLEVLNQ SLSNTITSDS LSYPPNMNNY MEQMAMAMNK  420
LSTLESFVRQ ADLLRHQTIH RLNQILTTHQ AARCFIAMAE YFHRMRALSS LWLARPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493559.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1578911e-86AC157891.3 Medicago truncatula chromosome 7 clone mte1-1i2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493559.10.0bZIP transcription factor TGA10-like isoform X2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S2XRU40.0A0A1S2XRU4_CICAR; bZIP transcription factor TGA10-like isoform X2
STRINGXP_004493558.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-173bZIP family protein