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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004492904.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
Trihelix |
Protein Properties |
Length: 346aa MW: 38600.5 Da PI: 10.0549 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004492904.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 70.9 | 2.3e-22 | 40 | 133 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr...tsessstcpyfdqle 86
+Wt +e+ aLi+a+r+++ +l+r++lk+++W+ev++++ + + +++++qC++k+e+l+kry+ + ++ ++ +s+sss++++f++++
XP_004492904.1 40 CWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVtarcpNASPTNKTAVQCRHKMEKLRKRYRSEIQRLRSLpipRSRSSSSWVHFKSMD 133
8***************************************9999*****************************99865559999*********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MASSPPSSPT DSNPPSAVPL PLPSSAPPPT TSSRRLPPPC WTPEETAALI DAYRDKWYSL 60 GRTNLKATHW QEVADAVTAR CPNASPTNKT AVQCRHKMEK LRKRYRSEIQ RLRSLPIPRS 120 RSSSSWVHFK SMDSMEKGPS PPPKLENPNH HRETLDENDD LDDDDLYEEL KSAAAGGSGS 180 GNTRSLDKLY RNGASGGGFR IRIPTGVSVA QPGSKFFGHQ KMNNNQSESG SRGCINGGTR 240 LVKERVGLGK REREREVERE RDPVGEMVSA IKVLRDGFVR MEQMKMEMAR EIETMRMEME 300 MKRTEMILES QQRIVEAFAK AVSEKNKKKL HKGNSNNNTV ASPSES
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC149129 | 2e-84 | AC149129.3 Medicago truncatula chromosome 7 clone mth2-139m18, complete sequence. |