 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004492805.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
WRKY |
| Protein Properties |
Length: 214aa MW: 24582.9 Da PI: 8.3145 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004492805.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 103.7 | 1e-32 | 135 | 193 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+++fprsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+
XP_004492805.1 135 LDDGYRWRKYGQKAVKNTKFPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP 193
59********************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MMENQDLSPN PPPLLQNNNT SIPFFFTNPL ESQDDQGLAI GDIDIWGNFF LGQNNNLLVG 60
DGPKKTLMDV QCTSSNLVIN NNNEIISGSY KHEEEEEEKL MGNKEEKRVK GGRVMKKTTR 120
VPRFAFQTRS VDDILDDGYR WRKYGQKAVK NTKFPRSYYR CTHHTCNVKK QVQRLSKDTS 180
IVVTTYEGIH NHPCEKLMET LTPLLKQIQF LASL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 3e-24 | 125 | 192 | 7 | 74 | Probable WRKY transcription factor 4 |
| 2ayd_A | 3e-24 | 123 | 192 | 2 | 71 | WRKY transcription factor 1 |
| 2lex_A | 3e-24 | 125 | 192 | 7 | 74 | Probable WRKY transcription factor 4 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT147703 | 1e-126 | BT147703.1 Medicago truncatula clone JCVI-FLMt-5C22 unknown mRNA. |
