 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_004492711.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
MYB |
| Protein Properties |
Length: 303aa MW: 34346.1 Da PI: 6.5074 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004492711.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+WTteEde+l++++++ Gg+ +W+ ++ g+ R++k+c++rw +yl
XP_004492711.1 14 KGPWTTEEDEILANYINKNGGHgSWHELPKITGLLRCGKSCRLRWTNYL 62
79*******************9***********99************97 PP
|
| 2 | Myb_DNA-binding | 57.5 | 3e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE++l +++++ lG++ W++Ia+ ++ gRt++++k++w+++l
XP_004492711.1 68 RGPFTPEEEKLVIQLHAILGNR-WAAIASQLP-GRTDNEIKNFWNTHL 113
89********************.*********.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MGRTPCCEKK GLKKGPWTTE EDEILANYIN KNGGHGSWHE LPKITGLLRC GKSCRLRWTN 60
YLRPDIKRGP FTPEEEKLVI QLHAILGNRW AAIASQLPGR TDNEIKNFWN THLKKRLESM 120
GIDPKTHEPV ASSTSYPNHN SHSSVSTRHM AQWESARLEA EARLSIDTSN FNNNNNKSKN 180
PNSISETDSS DYFLRIWNSA VGDAFRDIRK HDTDNNKYKT SCCQSPSSAV TAELASNNQL 240
SNGVKEEFEW RNYKFCVEDM IHGSDSSSSN DLEDSPDTAL QLLLDFPMNN DMSFLENSFD 300
CPL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC123899 | 3e-86 | AC123899.15 Medicago truncatula clone mth2-33n6, complete sequence. |
