PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004492567.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 296aa    MW: 33832.8 Da    PI: 6.0857
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004492567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.55.4e-23125186159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK++  ++fpr+Y+rCt++   gC+++k+v++ +e+p + ++tY g+H+++
  XP_004492567.1 125 VEDGHQWRKYGQKKILHNDFPRNYFRCTHKhdqGCKATKQVQKIREEPPLHKTTYYGHHTCK 186
                     58***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-24115186IPR003657WRKY domain
PROSITE profilePS5081118.636120188IPR003657WRKY domain
SuperFamilySSF1182908.76E-23123186IPR003657WRKY domain
SMARTSM007743.3E-33125187IPR003657WRKY domain
PfamPF031061.1E-22126186IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MENENLGHGR GKIIEELLRG RDLANQLRQV MNEGGDIDNN NNNNGSTTPF AEHLLMEVLM  60
TFTNSLLFLK NPSTSESFDV SDLQLTKSED SLESNCKSSI LKERRGCYKR RKILQTWEKE  120
SEFPVEDGHQ WRKYGQKKIL HNDFPRNYFR CTHKHDQGCK ATKQVQKIRE EPPLHKTTYY  180
GHHTCKVLLN PEIIVDSLSP SDHSSMFLSF DNSFPTPTKQ DCPFLSSSGK RECKKEDNIL  240
VNIPPPPPPS SSNNDYLSEL TFDESSTLDS DHLVVDIPHI LYGSSGFDEV LNWTLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-19125186869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004492567.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004492567.10.0probable WRKY transcription factor 70
TrEMBLA0A1S2XPP50.0A0A1S2XPP5_CICAR; probable WRKY transcription factor 70
STRINGXP_004492567.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-36WRKY DNA-binding protein 70