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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_004491858.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
WRKY |
| Protein Properties |
Length: 516aa MW: 56733 Da PI: 7.0655 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004491858.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.7 | 2.4e-33 | 224 | 281 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkver+ d++++ei+Y+g+Hnhek
XP_004491858.1 224 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAP-DGHITEIIYKGQHNHEK 281
8****************************************.***************85 PP
|
| 2 | WRKY | 107.3 | 7.9e-34 | 402 | 460 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++dpk+v++tYeg+Hnh+
XP_004491858.1 402 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHD 460
59********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:1900150 | Biological Process | regulation of defense response to fungus |
| GO:1900425 | Biological Process | negative regulation of defense response to bacterium |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 516 aa
Download sequence Send
to blast |
MSTTNSTDAD TPPQQPPRPT ITLPPRPSVE AFFAGAASPG PMTLVSSFFA TESATFSQLL 60
AGAMASPLAF STAVDSKEDD GTYRFKQSRP MNLVIARSPV FTIPPGLSPS GFLNSPGFFS 120
PQSPFGMSHQ QALAQVTAQA VLAQSHMHMQ PDYQPVSLDY QPVSLEAPTE PPVENPSFTR 180
NETSEVQVVA PISEPRNAQT ETSELSYSDK KQQPSSLPID KPADDGYNWR KYGQKQVKGS 240
EYPRSYYKCT HLNCPVKKKV ERAPDGHITE IIYKGQHNHE KPQANRRIKD NSDVNGNANV 300
QPKSDSNSQG WFANSNKTSE SVPDCSVVES DQTSNQGAPR PLPGLSESEE VGDAGNKEEG 360
DDCEPNPKRR SIEPVVPEVP LSQKTVTEPK IIVQTRSEVD LLDDGYRWRK YGQKVVKGNP 420
HPRSYYKCTS AGCNVRKHVE RASTDPKAVI TTYEGKHNHD VPAARHSSHN TASSNSMPSK 480
PQPVAAEKHP LLKDMEFGNN NQRPVHLRLK EEQIIV
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |
