PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004491588.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 502aa    MW: 55523.3 Da    PI: 5.2214
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004491588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.11.8e-23109165259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk  e  rsYYrCt+ +C++kkk+   + d+++   t+ geHnh 
  XP_004491588.1 109 QDGYNWRKYGQKNVKRIELIRSYYRCTHLDCQAKKKLHLLN-DGSFAGYTFVGEHNHA 165
                     7*************************************999.***************5 PP
2WRKY93.12.1e-29287345159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK+vkg+++pr+YYrC++ gCp+k++vers ++pk v+ tYeg+H+he
  XP_004491588.1 287 VNDGHRWRKYGQKMVKGNTNPRHYYRCSYLGCPAKRRVERSPREPKNVISTYEGQHDHE 345
                     58********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.926103167IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-20104167IPR003657WRKY domain
SuperFamilySSF1182902.75E-19106167IPR003657WRKY domain
SMARTSM007743.5E-20108166IPR003657WRKY domain
PfamPF031061.4E-17109164IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.0E-30276347IPR003657WRKY domain
SuperFamilySSF1182908.37E-26281347IPR003657WRKY domain
PROSITE profilePS5081129.964282347IPR003657WRKY domain
SMARTSM007745.4E-33287346IPR003657WRKY domain
PfamPF031065.7E-23288344IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MDSSQESADH DVSSDKVQQE ANPQSDTSMS QEIDDDTKTN LSEPEEAKSI PSIEAQNEMG  60
DSNATVRALV LPNSIPLEEH SQSSNTLSQE LPPLRSGQDS LSIREKVSQD GYNWRKYGQK  120
NVKRIELIRS YYRCTHLDCQ AKKKLHLLND GSFAGYTFVG EHNHAGPQSN TVSSPVDRVL  180
PVVEQGSHSR SSLAGVEGQD KSSGEDERRP QQIKPLHSVP ASKVSGTDEL KAAQSQLAAK  240
GEVHKYENRE AKRLKKDNSN TDTNGIGVST GESGVVVVET ESEVDFVNDG HRWRKYGQKM  300
VKGNTNPRHY YRCSYLGCPA KRRVERSPRE PKNVISTYEG QHDHENPAER GVTHNTAKNT  360
QTKGINGKMK TQSGGNTVYA ETGECSYSHS KSWLNKESNS KPNYDSIFRA VVLPDIGLKC  420
ELNEEEQQNE DPSTKEDSVS NAMMLDPSSE VPSRSNEHVE DEVRTTSEGI NDCANVVTGH  480
DTSSTTSEFD KESTSDTEPF QS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-25271348178Probable WRKY transcription factor 4
2lex_A2e-25271348178Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004491588.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004491588.10.0WRKY transcription factor 1-like
TrEMBLA0A1S2XMF90.0A0A1S2XMF9_CICAR; WRKY transcription factor 1-like
STRINGXP_004491588.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93583343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.25e-55zinc-dependent activator protein-1