PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004491474.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 555aa    MW: 60801.2 Da    PI: 7.2113
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004491474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.71.8e-31213270260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ +++++ei+Y+g+H+h+k
  XP_004491474.1 213 NDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSD-EGQITEIIYKGTHDHPK 270
                     8***************************************9.***************85 PP
2WRKY106.31.6e-33375433159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  XP_004491474.1 375 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 433
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-26205271IPR003657WRKY domain
PROSITE profilePS5081122.596207271IPR003657WRKY domain
SuperFamilySSF1182901.44E-24210271IPR003657WRKY domain
SMARTSM007742.2E-33212270IPR003657WRKY domain
PfamPF031062.4E-24213269IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.3E-38360435IPR003657WRKY domain
SuperFamilySSF1182902.35E-29367435IPR003657WRKY domain
PROSITE profilePS5081138.825370435IPR003657WRKY domain
SMARTSM007743.1E-39375434IPR003657WRKY domain
PfamPF031063.3E-26376433IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MEAATTNSGA PHSSSELHVE GTPHDPNQTG SGQNSMARYK LMSPAKLPIS RSPCITIPPG  60
FSPTSFLESP VLLSNMKVEP SPTTGSLPQL LQTLHGSMPS ATFPLTTTCF NTGTVNDRKS  120
SFFEFKPHER NMVPADFTNH VSEQSTQVES QGKGQSFGSS PLIENEIADQ SNELSLSSPV  180
QMVSSGASAH VDVNLDELNH KGNTTNAPEK VSNDGYNWRK YGQKHVKGSE FPRSYYKCTH  240
PNCEVKKLFE RSDEGQITEI IYKGTHDHPK PQPSNRYSAG SIMSMQGERS DRASSLAGRD  300
VEPNRTPEQS TVATNDHSLE GARFASTRIN DEVDDDDIFS KRRKMELGNA DIIPIVKPIR  360
EPRVVVQTTS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTNAGCPVRK HVERASHDPK  420
AVITTYEGKH NHDVPAAKNS SHDMAGHAAS GGQTRIKFEE CDTISLDLGM GISSPAENRS  480
NGQGKMLFSE LANSQTPTSN SNFKFVHTTS APSYYGVLNN SSNLFGSREN RNDGSSLNHS  540
SYPCSQSMGR ILMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-38202436778Probable WRKY transcription factor 4
2lex_A2e-38202436778Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004491474.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004491474.10.0probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV01e-180WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A1S2XM720.0A0A1S2XM72_CICAR; probable WRKY transcription factor 20 isoform X1
STRINGXP_004491474.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein