 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004490782.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
MYB_related |
| Protein Properties |
Length: 427aa MW: 48444.1 Da PI: 6.643 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004490782.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.5 | 2.3e-16 | 47 | 91 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r rWT eE++++++a k++G W++I +++g ++t+ q++s+ qk+
XP_004490782.1 47 RERWTDEEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 91
78******************88.*********.************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009734 | Biological Process | auxin-activated signaling pathway |
| GO:0010600 | Biological Process | regulation of auxin biosynthetic process |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MDSDSMAIQG QEGVHSVVHV QKLIDQFSCG DDYALKVRKP YTITKQRERW TDEEHKKFLE 60
ALKLYGRAWR RIEEHVGTKT AVQIRSHAQK FFSKINRDTD GNTTTLVESI EIPPPRPKRK 120
PIHPYPRKLV EIRKNEISNL EQPLRSNSIV SLDFGQENKS PKSVLSSVAL ETLGFSDSDS 180
PTGSLSPVSS MSAVHTSSFP LLERKLSFEQ DMPPQIDELN DGSAHDEQLL EKPELFSKEH 240
VSTKDEAVDE SPGRTLKLFG TTLLVKDTCK PSSTSMEASN SKQTTTMHLL QQPQSECSDI 300
SHTTVVPWWT ISRNSAFKPL HKEHEEKPLH SNHEECEDKE TQKEGSCVGS NNTSSTNDGE 360
SNEISNDQDK IDHVNYLVGH ITPSETVRHK TFGKGFVPYK RCMAERERQC STVTEERREH 420
QRIRLSL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT141701 | 0.0 | BT141701.1 Medicago truncatula clone JCVI-FLMt-19O16 unknown mRNA. |
