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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004490703.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
LBD |
Protein Properties |
Length: 230aa MW: 25244.4 Da PI: 7.4637 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004490703.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 130.8 | 5.7e-41 | 41 | 140 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+kll ++pe +r da++s+vyeA+ r+rdP+yG++g i++lqqq+++l+ael+
XP_004490703.1 41 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLMEVPEGQRGDAANSMVYEANLRLRDPIYGCMGAISSLQQQVQSLQAELQ 135
7********************************************************************************************** PP
DUF260 96 llkee 100
++++e
XP_004490703.1 136 AIRAE 140
99876 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MFGCQETERL DELEKVNSEG ETSLQMGRKH FYGTTLNTVT PCAACKLLRR RCAEECPFSP 60 YFSPHEPQKF AAVHKVFGAS NVSKLLMEVP EGQRGDAANS MVYEANLRLR DPIYGCMGAI 120 SSLQQQVQSL QAELQAIRAE ILKYKYREAT NFISSNHSTL VSSMPNSTQN SSQPLSSSSS 180 SLPLPKLLPS HESIILSSLS SSSASNSVYT SNKSTMSHGS ISSENIPYFV
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT143889 | 1e-120 | BT143889.1 Medicago truncatula clone JCVI-FLMt-13L16 unknown mRNA. |