PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490676.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 334aa    MW: 38445.4 Da    PI: 9.2092
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.33e-23224280259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgynW+KY  K  kgse+ rsYY+C  ++C vkkkver+  d++++e+ Y+g+Hnh 
  XP_004490676.1 224 DDGYNWKKYEEKLEKGSENQRSYYKCNWPNCAVKKKVERNI-DGEIIETQYKGTHNHY 280
                     8****************************************.***************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-20218282IPR003657WRKY domain
SuperFamilySSF1182904.18E-19221282IPR003657WRKY domain
SMARTSM007741.6E-21223281IPR003657WRKY domain
PROSITE profilePS5081119.164224282IPR003657WRKY domain
PfamPF031061.5E-17224279IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005794Cellular ComponentGolgi apparatus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MPIRISNRVI IIQKKQWRIL GFFSSIIGLI SYALSSSFIH LFGEWNFIKI IIYAMVSFTI  60
SVMMLFLKKW KLSRRFLLKA HLGVLVLLLT SLYSFVSDNK ALNGKPDLLS LISSASFALM  120
SFCLSRQIDL GFESDLLNFF LGCLTLQLMK INLMLSIVAA IFCYSLMVLR SKFESRPAIG  180
NLRMEDDVAI EIFDAEDNNN RNELKNYSNG NQKNESLRRR VHDDDGYNWK KYEEKLEKGS  240
ENQRSYYKCN WPNCAVKKKV ERNIDGEIIE TQYKGTHNHY KPKSAMKRNS SSEFVYSLLQ  300
SKTFHTDLPD QLLASQGNEQ LDSDAEPESS SVSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-142242821877Probable WRKY transcription factor 4
2lex_A1e-142242821877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490676.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490676.10.0uncharacterized protein LOC101503578 isoform X1
TrEMBLA0A1S2XKG00.0A0A1S2XKG0_CICAR; uncharacterized protein LOC101503578 isoform X1
STRINGXP_004490676.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF147431012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.12e-23WRKY DNA-binding protein 33