PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004489160.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 584aa    MW: 65470 Da    PI: 6.979
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004489160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.82.9e-30214273159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_004489160.1 214 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCADDMSILITTYEGTHNHP 273
                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-31200273IPR003657WRKY domain
SuperFamilySSF1182909.42E-27208274IPR003657WRKY domain
PROSITE profilePS5081127.313209275IPR003657WRKY domain
SMARTSM007741.3E-36214274IPR003657WRKY domain
PfamPF031066.1E-27215273IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MSKMSSPSCS EIEEKKVTSI SHEANFSTQQ EVTKEDKFQY VKDEMGEVKE ENERLKMMLE  60
RVEKDYNTLQ LRFFDIVNKE VSNKGLTNSS TSHDETNEEE PEFVSLSLGR TPPNEYKKEA  120
RIEKPKEKEE DMEINLSLGL DSKYMLSMEL VSDNLSPMNS SEELPKEKEL VEETLLMSSN  180
KSTKMINVND DISDQMPAKR VRVSVRAKCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC  240
TVAPACPVRK QVQRCADDMS ILITTYEGTH NHPLQVSASA MAYTTSAAAS MMLSGSSTSS  300
SSSSHHENHH QNSTSFGNPP TLLNGLNFTH QIDESKPKHY FLPPNHISHN NNLFPTITLD  360
LTSSSSTHIH NNNNNNNNNN NLPSNIASIP RFSPNNLNFC STQPNYMTPS SNWGNKLGFL  420
NNNTTTMPIE KTTQMRPFFQ QQQQQHNFYQ NSMANQIPYS KELSLAETIT KAISNDPSLH  480
SVIASAVSSI VQGSSNNGGK HEEIGLNLKL GENSQLVSNN LLNQNGKGCI NGYFKRLNST  540
SSQTKNFMLL QPSLPFSVSK SSTSKAPSIV NHINHYDLNM NTHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-20205274876Probable WRKY transcription factor 4
2lex_A4e-20205274876Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004489160.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004489160.10.0probable WRKY transcription factor 72
TrEMBLA0A1S2XGT80.0A0A1S2XGT8_CICAR; probable WRKY transcription factor 72
STRINGXP_004489160.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.14e-65WRKY DNA-binding protein 72