 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004489004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
BES1 |
| Protein Properties |
Length: 325aa MW: 34955.9 Da PI: 8.1512 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004489004.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 214.8 | 2e-66 | 2 | 144 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95
++++r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e++++ag sa a+p+ss++
XP_004489004.1 2 TSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPIERMDVAGGSAMATPCSSYH 96
5899******************************************************************************************* PP
DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
+sp++sy++sp sssfpsp s++++ + + +sl+p+l++ls+ sss
XP_004489004.1 97 --------PSPCASYNPSPGSSSFPSPRSSSHAVNPNGdgNSLIPWLKNLSSGSSS 144
........*******************9988876665567**********996665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MTSGTRQPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60
WIVEPDGTTY RKGCKPIERM DVAGGSAMAT PCSSYHPSPC ASYNPSPGSS SFPSPRSSSH 120
AVNPNGDGNS LIPWLKNLSS GSSSTSSSKL PQLYIHTGSI SAPVTPPLSS PTARSSQTKA 180
DWEVRSARPG WGGQQYPFLP SSTPPSPGRQ VLDPDWFAGI RMPQGGPTSP TFSLVASNPF 240
GFREEVFCGS DSRMWTPGQS GTCSPAVAAG SDHTADIPMA EAVSDEFAFG SHTAGLVKPW 300
EGERIHEDCD GSDDLELTLG CSKTR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 5e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 5e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 5e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 5e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC207601 | 0.0 | AC207601.5 Medicago truncatula chromosome 2 BAC clone mth2-45c5, complete sequence. |
