 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004489002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
BES1 |
| Protein Properties |
Length: 321aa MW: 34887.9 Da PI: 8.1492 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004489002.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 210.8 | 3.6e-65 | 4 | 143 | 3 | 148 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqss 97
++r ptwkErEnnk+RERrRRaiaaki++GLR++Gn++lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g s+ asp+ss++
XP_004489002.1 4 GTRLPTWKERENNKKRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLEHMDIVGGSSAASPCSSYH-- 96
6899*****************************************************************************************.. PP
DUF822 98 lkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvss 148
+sp++sy++sp sssfpspss+ +++++ +sl+p+l++ls++ss
XP_004489002.1 97 ------QSPCASYNPSPVSSSFPSPSSSPYTTNHNVdgNSLIPWLKNLSTASS 143
......*******************9988776665466*********988665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MTLGTRLPTW KERENNKKRE RRRRAIAAKI FSGLRMYGNF RLPKHCDNNE VLKALCNEAG 60
WTVEPDGTTY RKGCKPLEHM DIVGGSSAAS PCSSYHQSPC ASYNPSPVSS SFPSPSSSPY 120
TTNHNVDGNS LIPWLKNLST ASSPKLPHPY LHSGSISAPV TPPLSSPTAR TPRMNSDWDD 180
RSARPGWTGQ HYSFLPSSGP PSPGRQIVDP EWFAGIKLPH TSPTSPTFNL VSPNPFAFKE 240
DGFSGSGSRM WTPGPSGTCS PAIAAGSDHN ADIPMSEAAI SDEFAFGSNT FGIVKPWEGE 300
RIHEEFVADD LELTLGNSKT R
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 3e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 3e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 3e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 3e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC207601 | 1e-171 | AC207601.5 Medicago truncatula chromosome 2 BAC clone mth2-45c5, complete sequence. |
