PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004488183.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 400aa    MW: 45396 Da    PI: 7.7618
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004488183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.94.9e-29198256259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrC++  +Cpv+k+v+r+ +d++++++tYeg+Hnh+
  XP_004488183.1 198 VDGCQWRKYGQKTAKGNPCPRAYYRCSMGnSCPVRKQVQRCFKDETIFITTYEGNHNHQ 256
                     59**************************989***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-31183258IPR003657WRKY domain
SuperFamilySSF1182905.23E-26191258IPR003657WRKY domain
PROSITE profilePS5081128.197192258IPR003657WRKY domain
SMARTSM007741.1E-32197257IPR003657WRKY domain
PfamPF031061.9E-25199256IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MEENIEIKKL LEVDEKQTYD HNNIDLQNTK ETSSFHNNTI GNIRVKLDEA KKENENLRSM  60
LNLVNERCNV LQNHLLLAMH MHQLSSSPQN NHNMPKGSRQ DEEEPILPTR QFLNIDEPSP  120
SYSSKKEGFS LVESNENNKG RKFACEDINI NNEDSINHEG EINSKIKSQE QMEDQTSKVT  180
CTRARVSIRA RSHFSLMVDG CQWRKYGQKT AKGNPCPRAY YRCSMGNSCP VRKQVQRCFK  240
DETIFITTYE GNHNHQLPPT ARPMASLTSS ALNTLLSTST TNLQYGNTFI FSSPFSPPNS  300
TAIATFSPSP TCPTITLDFT IPYSNNFQFK KNTSTPLFPF PLQSFEGFPS MINKERKLAL  360
VDVVSEAIEK NPSLKASLFE AMSSFTNVNP LNINNHIQIK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22184259175WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004488183.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004488183.10.0WRKY transcription factor 42-like isoform X2
TrEMBLA0A1S2XGU80.0A0A1S2XGU8_CICAR; WRKY transcription factor 42-like isoform X2
STRINGXP_004488182.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.13e-49WRKY family protein