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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004486947.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
FAR1 |
Protein Properties |
Length: 743aa MW: 85768.2 Da PI: 6.9834 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004486947.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 86.8 | 3.1e-27 | 29 | 114 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fY+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk+++dgkw+v+++++eHnHel p
XP_004486947.1 29 FYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLP 114
9***************************************999877....9************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 743 aa
Download sequence Send
to blast |
MDSSVVMGNS VQEPNNEMEF ESHEAAYAFY KEYAKSVGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQDGKWY VYSFVKEHNH ELLPAQAHFF 120 RSHRNSDPLS NDVRMRRRKN STPGSKLFSS YQNVDCLENF MMKHQHDKGR SLVLEVGHAQ 180 LLLELFMHMQ EENPKFFYAV DLNEEHRLRN VFWVDSKGLE DFSYFSDVVS FDTTYFTSKY 240 KIPLVLFIGV NHHVQPTLLG CALIADETVY TYAWLLQTWF VAMGERAPQV FLTDQNDAIK 300 AAVAAVFPGT RHCFCLWHVL EKIPKQLEFL STWHDSFMEK FNKCIFKSWT EEQFERRWWK 360 LVDRFKLRDV KWVQSLYDDR ACWVPTFMRD ISFVGLSSNS RSEILNSFFD KYVQVDTSLR 420 EFIEQYRLIL EDRNEEEAKA NFDAWHETPE LKSPSPFEKQ LLLVYTHEIF QKFQFEVLGA 480 SACHLKKEND GVITTYNVKD FENIQNYMVE WNTSNSDICC SCHLFEYKGY LCRHAIVVLQ 540 MSGVFSIPTK YILKRWTNAA LSRHPIGEKL EEVQSKVRRF NDLCRRAIIL GEEGSLSQES 600 YYIALEALSE ALKQCANLNN SVENAALATH VGCNVEEEYQ SIIASNDNVS DPKMNTGKKA 660 LRTGVASRSL VSVETVEGNK GKVPQLGAAS GNDGFQQMEP TDLRSHNMMP MQFHSMVPVL 720 FHNVSSPFHA AASTHLHDNH LPP
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 123 | 136 | RNSDPLSNDVRMRR |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC233177 | 0.0 | AC233177.2 Medicago truncatula strain A17 clone mth2-54k10, complete sequence. |