PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004486508.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 485aa    MW: 53601.5 Da    PI: 5.9916
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004486508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.1e-31263321259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_004486508.1 263 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 321
                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.9E-31257323IPR003657WRKY domain
PROSITE profilePS5081132.925257323IPR003657WRKY domain
SuperFamilySSF1182903.66E-26260323IPR003657WRKY domain
SMARTSM007741.4E-37262322IPR003657WRKY domain
PfamPF031061.1E-25264321IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MCSIFVSIFT TMENNNYQGD LTDIIRASGG AEPQQHHDQW HHNHNHDQFS SDIHPLSFSS  60
ILEGTNNIFG DPLYSTLRDP FLQQLDTATN TTGSSSSSST SSSTSYFNIT TTSTTTSTSL  120
EQQGVSIIDV ASSAGVALDH QHHDIMRSRR PICKNIFSNM IQISPNNAKL LPYDSNSNIM  180
APSPRPIINK PSSSSAIVNV SPNININAKD SLLDNNNTGG GGVQISSSRN TNLKRRKNQA  240
KKVVCIPAPA AANSRQTGEV VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS SKGCSARKQV  300
ERSRTDPNML VITYTSEHNH PWPTQRNALA GSTRSQPTKN NNASIKNSSE TSSQLENNTT  360
KPKEEESNNN SDGNDSPVNV NAVKEEMELD IEKQFEMDEG EFSDGLSYKP TMIESNQSHE  420
DFFAELGEIE ADPLNLLFNQ GFGSSNVDDH QRESSSKGLD PFHLFDWSGD NNTNNSFEEP  480
NKRRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-24237324280Disease resistance protein RRS1
5w3x_D1e-24237324280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004486508.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150388e-57AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486508.10.0probable WRKY transcription factor 14
TrEMBLA0A1S2XDA20.0A0A1S2XDA2_CICAR; probable WRKY transcription factor 14
STRINGXP_004486508.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.14e-84WRKY DNA-binding protein 14