PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00028301-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

bZIP

Protein Properties

Length: 320aa MW: 35874.5 Da PI: 9.4438

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00028301-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50	6.2e-16	250	300	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k +el+k+ WALNUT_00028301-RA 250 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK-RKELEKML 300 79****************************************5.57888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.6E-15	241	298	No hit	No description
SMART	SM00338	6.3E-12	246	318	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.691	248	293	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.31E-10	250	295	No hit	No description
Pfam	PF00170	2.4E-13	250	298	IPR004827	Basic-leucine zipper domain
CDD	cd14707	8.50E-23	250	304	No hit	No description
PROSITE pattern	PS00036	0	253	268	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MGIETMGSQG VGNSNGKQSQ LQPLARQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN 60 VWTAEVHQST GMDIEGTAQA SQTALQRQAS LSLTSALSKK TVDEVWRDIQ QSKNSEEKKS 120 RERQPTLGEM TLEDFLVKAG IVAETSTEKS SAGPVGVDQN TALQFPQQGQ WMQYQPQQYQ 180 QPQQSMMGVY MPGQPIPQPL HMGAGAVMDV PYPENQVALT SPLMGNLSDT QMPGRKRGVP 240 EDMIEKTVER RQKRMIKNRE SAARSRARKQ AYTNELENKV SRLEEENERL RKRKELEKML 300 PSAPPPEPKY RLRRTSSAPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018842402.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-103	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2I4GET0	0.0	A0A2I4GET0_JUGRE; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_004306446.1	0.0	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	4e-80	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]