PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00025280-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 477aa    MW: 51941.6 Da    PI: 9.0105
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00025280-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.3e-32196252360
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                         DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geH h+k
  WALNUT_00025280-RA 196 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHSHSK 252
                         9***************************************.***************85 PP
2WRKY106.31.6e-33396453259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver+++dp+++++tYeg+Hnhe
  WALNUT_00025280-RA 396 SDGFRWRKYGQKVVKGNPYPRSYYRCTSLKCSVRKHVERASDDPRAFITTYEGKHNHE 453
                         8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-30181253IPR003657WRKY domain
SuperFamilySSF1182906.8E-26191253IPR003657WRKY domain
SMARTSM007742.9E-36194252IPR003657WRKY domain
PfamPF031064.2E-25196250IPR003657WRKY domain
PROSITE profilePS5081123.112196253IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.4E-35380455IPR003657WRKY domain
SuperFamilySSF1182901.05E-28389455IPR003657WRKY domain
PROSITE profilePS5081135.244390455IPR003657WRKY domain
SMARTSM007746.0E-39395454IPR003657WRKY domain
PfamPF031062.2E-26397453IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MDIKEAERVV IAKPVASRPT CSSFRSFSEL LAGAIDASPS NVCSTAVAAI RPKTVRFKPA  60
VIRAPAGLVS SQAGISGAAV CNSSDNVSKF DSKSTVVYKP LAKLVSKTTV SLLANMGNFS  120
TGHQQQQQQP VEASVQHSNQ EKRNFRSQIS SNLHQNIPSH VESNQTGGHS KIASPNLEED  180
PKAVLTTANS DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSLDGQIA  240
EIVYKGEHSH SKPQPPKRNS SGTQGLGFVS DGPGQDANNT LWANHHNEGN EGSEGRVESQ  300
NEVGLPARST YHGNIPVPCD PVATGAVNVG GVTPDNSCGL SGECEEGSKA MEPEDDEPRS  360
KRRKSESRSY EAGVSGEGIQ EPRIVVQNST DSEIMSDGFR WRKYGQKVVK GNPYPRSYYR  420
CTSLKCSVRK HVERASDDPR AFITTYEGKH NHEMPLRNSN PVVSETDSLA PKGKDKQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-32183455777Probable WRKY transcription factor 4
2lex_A5e-32183455777Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018812962.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_018812963.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_018812964.10.0PREDICTED: WRKY transcription factor 44-like
TrEMBLA0A2I4E0N60.0A0A2I4E0N6_JUGRE; WRKY transcription factor 44-like
STRINGEMJ063360.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67903450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-111WRKY family protein