 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
WALNUT_00024814-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
|
| Family |
SBP |
| Protein Properties |
Length: 322aa MW: 35243.3 Da PI: 8.9043 |
| Description |
SBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| WALNUT_00024814-RA | genome | JHU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SBP | 132.8 | 1.2e-41 | 25 | 101 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
C v+gC++dls++++yhrrhkvCe+hsk+++v+++gleqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+
WALNUT_00024814-RA 25 CLVDGCNSDLSKCRDYHRRHKVCEIHSKTSKVTIRGLEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKPQP 101
**************************************************************************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MESSSSSGST KRARAAGNGG QVPLCLVDGC NSDLSKCRDY HRRHKVCEIH SKTSKVTIRG 60
LEQRFCQQCS RFHSLGEFDE GKRSCRKRLD GHNRRRRKPQ PESLSLNSGR LPSSYQGTRI 120
LTFSSPQLFP QGPVASSAWF GAVKVESDTA MLYNNHSQLN FFDRKNITPD SLFHNYKEGK 180
QFPFSQGTSS SLLPGAAVCQ LPPDANFASN NASSSQKEFS NELNRVINSD CALSLLSSTR 240
AETRQVGLSQ MMLQFNPSPS AQSSLVPSLQ YNGLGMEGKT MSSALVNDCS SNANLHCEGM 300
FSIGPDGSSA SGPHQTHSFL WE
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 81 | 98 | KRSCRKRLDGHNRRRRKP |
