PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00022455-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 218aa    MW: 24150.2 Da    PI: 10.0373
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00022455-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.81.3e-14157207454
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                         ++r +r++kNRe+A rsR+RK+a++ eL+ +v+ L++eN +Lk + +e k 
  WALNUT_00022455-RA 157 DRRNKRMIKNRESAARSRARKQAYTSELQLEVARLQEENARLKRQQKEVKT 207
                         789*************************************99988877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-13150206No hitNo description
SMARTSM003384.7E-13154214IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921156208IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-10158207No hitNo description
CDDcd147074.94E-27158204No hitNo description
PfamPF001709.4E-13158208IPR004827Basic-leucine zipper domain
PROSITE patternPS000360161176IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MEDVWKDISL ASLHDPSYNT TLSSTVTNTT TTHKPAFCGM ILQDFLARPL GKDRPTRFAS  60
SSGTGDGHSS ALETTLLGSP APPPATILSL KSGSDFAYLQ SSCTPIGPNP RLQRHVSFTT  120
PSFVSSFNSV FDVSGSSLVL PSCCKRRAQE NDDNPGDRRN KRMIKNRESA ARSRARKQAY  180
TSELQLEVAR LQEENARLKR QQKEVKTKRY ISFAYMDL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018847904.11e-150PREDICTED: protein FD-like
TrEMBLA0A2I4GVH81e-149A0A2I4GVH8_JUGRE; protein FD-like
STRINGEOY150977e-66(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-43bZIP family protein