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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00022194-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | TALE | ||||||||
Protein Properties | Length: 696aa MW: 75926.6 Da PI: 7.4155 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.6 | 2.4e-09 | 398 | 430 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gLt +qV++WF N R + WALNUT_00022194-RA 398 HPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 430 89*****************************88 PP | |||||||
2 | BELL | 123.5 | 8.5e-40 | 257 | 328 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi WALNUT_00022194-RA 257 ERQEIQMKKAKLINMLDEVEQRYRQYHNQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQI 328 79*********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 8.7E-64 | 183 | 326 | IPR006563 | POX domain |
Pfam | PF07526 | 2.5E-48 | 190 | 325 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.05 | 371 | 434 | IPR001356 | Homeobox domain |
SMART | SM00389 | 7.8E-9 | 374 | 438 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.95E-11 | 374 | 435 | No hit | No description |
SuperFamily | SSF46689 | 7.27E-17 | 375 | 441 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.2E-28 | 377 | 441 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 3.7E-18 | 391 | 430 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 696 aa Download sequence Send to blast |
MATYFHGNSE IQAADGLQTL VLMNPAGYVQ YSDTPPPAQS AANNFVFLNS VAAAAAASSL 60 NYPHAPPPHT QQFVGIPVPT SASPASHDPN SQPMHSHHEI SALHGFVPRV QYNLWNSIDP 120 NAAAREIPRS QQGLSLSLSS QQPAYGSFRT DREVPSQSQA PAISGEDMRV SGGSSSSASG 180 VTNGMRSVQL SSKYLKVAQE LLDEVVNVGN GIKSEILKKA NGRTTVMGES SVAASGEGSV 240 GGEFASGKRA AELSTAERQE IQMKKAKLIN MLDEVEQRYR QYHNQMQIVI SSFEQAAGIG 300 SARTYTALAL QTISKQFRCL KDAITGQIRS ANRSLGEEDC LGGKIEGSRL KYVDHHLRQQ 360 RALQQLGMIQ HNAWRPQRGL PERSVSVLRA WLFDHFLHPY PKDSDKHMLA KQTGLTRSQV 420 SNWFINARVR LWKPMVEEMY MEELKEHEHN GSEDKISKSN EDSASKSIAL QDKCPATENQ 480 TKGFNSKQEN SANQSVAPAI SISKASTSPV GGNIRNQTGF TLIGSSELEG ITQGSPKKQR 540 SNEMLHSPRS VPSINMDVNS NEASNEQVSM KFGDERQSRD GYSFMGGQMN FIGGFGQYPI 600 EDIGRFDAEQ FAPRFSGNGV SLTLGLPHCE NLSLSATHHT FLPNQSIQLG RRVDIGEPND 660 FGAISTSNPH SSAAYENINI QNPKRFAAQL LPDFVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 8e-16 | 380 | 438 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 8e-16 | 380 | 438 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018809867.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_018809868.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_018809869.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_018809870.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_018809871.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 0.0 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A2I4DRV5 | 0.0 | A0A2I4DRV5_JUGRE; BEL1-like homeodomain protein 1 | ||||
STRING | XP_007162972.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1627 | 34 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-174 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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