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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
WALNUT_00017109-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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| Family |
TCP |
| Protein Properties |
Length: 208aa MW: 22707.8 Da PI: 8.4966 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| WALNUT_00017109-RA | genome | JHU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 106.3 | 5e-33 | 41 | 133 | 5 | 93 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasecea 75
k +++++hTkv+gRdRR+Rl+ caar+F+L++eLG+++d++tieWLl+qa+p+i++ g+ +a
WALNUT_00017109-RA 41 KAPSKDRHTKVNGRDRRIRLPPICAARVFQLTRELGYKTDGETIEWLLRQAQPSIIATIGStinggvassaatfgpsanttI-------DA 124
7899*********************************************************898877655553322222220.......22 PP
TCP 76 esssssasnsssgkaaks 93
+s+ ss s
WALNUT_00017109-RA 125 VSNISSCP---------S 133
22222222.........1 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MELEKINDLE MKLSSSSNNQ PTPNSQPIAT SASKAKLLPC KAPSKDRHTK VNGRDRRIRL 60
PPICAARVFQ LTRELGYKTD GETIEWLLRQ AQPSIIATIG STINGGVASS AATFGPSANT 120
TIDAVSNISS CPSSTSSKFP CVAETVHENR DHVVNKCAFR RPKPVLLPFE FGLVSNFDME 180
FSANEIAMLQ SVTDIEEGAK EKDPQKKF
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