PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00014705-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 308aa    MW: 34297 Da    PI: 8.2203
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00014705-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.81.9e-27161208249
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEE CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvve 49 
                         +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+v++
  WALNUT_00014705-RA 161 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSSEDPTVII 208
                         8*******************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.9E-27146208IPR003657WRKY domain
SuperFamilySSF1182906.02E-23152208IPR003657WRKY domain
PROSITE profilePS5081124.432155208IPR003657WRKY domain
SMARTSM007741.4E-28160214IPR003657WRKY domain
PfamPF031061.3E-20161207IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MDDGDQSDTT IVFAGDSSWA LRSDSDGVYF FTNHRETSIF SKFNWNLHPD DQNRNIGLYD  60
GSDLAGGLGF PDVDNKCNNS NSALQSSDPP LRVRSDSKAG GTTAPSNPSV SSCSSEGPPE  120
KSTGSCRTPP VIPNKVRKKG QKRVQQPRFA FVTKSEVDHL EDGYRWRKYG QKAVKNSPFP  180
RSYYRCTNSR CTVKKRVERS SEDPTVIIQH TKANTVITQY LDSPDQLGAA PPVSQLYYPK  240
VLHELPKDQN PFSTIQYNYS THHHQQSIPH HEVGKISHAV PEPIPLQLAP TDEGLLGDMV  300
PPNMRNRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-191532081065Probable WRKY transcription factor 4
2lex_A1e-191532081065Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018818475.11e-168PREDICTED: probable WRKY transcription factor 57 isoform X1
TrEMBLA0A2I4EGF91e-167A0A2I4EGF9_JUGRE; probable WRKY transcription factor 57 isoform X1
STRINGVIT_01s0011g00720.t011e-79(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108143140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.29e-40WRKY DNA-binding protein 57