PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00014531-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 723aa    MW: 78751.5 Da    PI: 5.5204
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00014531-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1031.7e-32242298259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g+Hnh 
  WALNUT_00014531-RA 242 EDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCQVKKKVERSH-DGQITEIVYKGTHNHA 298
                         7****************************************.***************7 PP
2WRKY103.41.3e-32461519159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k+v++tYeg+Hnhe
  WALNUT_00014531-RA 461 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDIKCVITTYEGKHNHE 519
                         59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.674236300IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.8E-28239300IPR003657WRKY domain
SuperFamilySSF1182901.7E-25240300IPR003657WRKY domain
SMARTSM007748.6E-36241299IPR003657WRKY domain
PfamPF031061.5E-25242297IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.9E-36446521IPR003657WRKY domain
SuperFamilySSF1182906.8E-28454521IPR003657WRKY domain
PROSITE profilePS5081138.251456521IPR003657WRKY domain
SMARTSM007747.6E-37461520IPR003657WRKY domain
PfamPF031061.4E-24462519IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MEVEDVKAIA GGSSSLELNP SKSIAERRAA KCGFNAKCLK TALFRTTSPL ASPGARLTIP  60
AGISPTALLD SPIMLPNIRA PHSPTTGTFP LPPLSHESLM LSSMAAEDGD RGSDVGSLNF  120
VPYENPDSLS GFYGFIDQNA DVDNNALESV PTQMDFEFPA ELPKADTIDD CAMGLSTDGK  180
VLKNMVMNAK CMDLSIHHSE VASDQKSLPK EPIHGEDVGA NHLLEGDLKG SYPSTGVLRA  240
SEDGYNWRKY GQKQVKGSEY PRSYYKCTHS NCQVKKKVER SHDGQITEIV YKGTHNHAKP  300
QPNRRASVSS TFSIDETSEM GEDGGTCIKS EGGSVWRNIQ LGSKDVKFGS DWRANGMEGT  360
SSASVLLEFS DPLSTAQRKS VGVLESGETP ELSSRLGSHD DDDNEDEAAQ GSVSLEDDAD  420
VDESESKRMK TENCLIETNL ASRAVREPRV VVQIESEVDI LDDGYRWRKY GQKVVKGNPN  480
PRSYYKCTSA GCSVRKHVER ASHDIKCVIT TYEGKHNHEV PVARNGGQIN SSGANAYPAA  540
TNVQSTLTLA RNMNVSERET HVQDLAPHFL RKPEFGNDQP RPSFLGNFNN DMKFGATPIY  600
QMKFPSLQNT ISYASLGLNS NCTFNLQSYP FVVPDFPISL PLELPNAGNL TLAGLDFNVG  660
KPVGPVQSFR SGQQLKENDA RFLRPKQEQN DDNLYDACLA TVDHGNASSS SSSSSSSIYH  720
RVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-34230521177Probable WRKY transcription factor 4
2lex_A4e-34230521177Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018815628.10.0PREDICTED: probable WRKY transcription factor 2
TrEMBLA0A2I4E8A70.0A0A2I4E8A7_JUGRE; probable WRKY transcription factor 2
STRINGXP_008218446.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-104WRKY DNA-binding protein 2