 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
WALNUT_00012011-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
|
| Family |
Dof |
| Protein Properties |
Length: 260aa MW: 28831 Da PI: 9.3983 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| WALNUT_00012011-RA | genome | JHU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 120.9 | 4.6e-38 | 18 | 77 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++++l+cprC+st tkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk
WALNUT_00012011-RA 18 PQEHLNCPRCNSTITKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKY 77
68999****************************************************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009639 | Biological Process | response to red or far red light |
| GO:0009845 | Biological Process | seed germination |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MEGEAPNTRP LTERRTRPQE HLNCPRCNST ITKFCYYNNY SLTQPRYFCK TCRRYWTEGG 60
SLRNVPVGGG SRKNKKYTPA ASTSNSKIPD LNPQSLSQIS SQNLINGAKK GHDLNLAFQT 120
YERYHGETQY VEVMPKIESD NRNQQVAGSA SSSTPLSALE LLRTGIASRG SNTFIPPPMI 180
DSSTLYSSGF PFQEFKPTPG TFSVDGVESR PYGVQENNGG KLLFPFGESK QISTTNEGEQ 240
KKGQGSSTGY WSSMLNGGYW
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT202286 | 2e-43 | KT202286.1 Prunus dulcis dof zinc finger protein (dof) mRNA, complete cds. |
