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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
WALNUT_00011373-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
|
| Family |
E2F/DP |
| Protein Properties |
Length: 311aa MW: 34027 Da PI: 6.4291 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| WALNUT_00011373-RA | genome | JHU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 26.4 | 1.1e-08 | 92 | 132 | 2 | 38 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse......d 38
++++Lr++++k ++ek+e+ g++t+neva+eLv+e +
WALNUT_00011373-RA 92 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnS 132
689********...*****999*************997766651 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042023 | Biological Process | DNA endoreduplication |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MGTRNQHLSR EDEEEDPPGR GAVSISGQSV STSRSIGSPS SRSEQTMATP ASDSTLFRLN 60
HLDIQGDDAG SQGAVASKKK KRGQRAVGGD KSGRGLRQFS MKVCEKVESK GRTTYNEVAD 120
ELVAEFADPG NSVTSPDQTE RLGLRNRIEK KAAYLQELEE QLLIMSARWF LSPSIKFIGL 180
QNLIQRNEQL YSSGNAPSGG VALPFILVQT RPHATVEVEI SEDMQLVHFD FNSTPFELHD 240
DNYVLKAMKF CERPQVDDMV HNFSADGGEG SSMSGVHQTQ IPLPSVSNTT VRPPASPPLP 300
GILKARVKHE H
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
