PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00007957-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 332aa    MW: 36352.6 Da    PI: 7.1863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00007957-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19123172154
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                         s+y+GVr++k +g+W+AeIrd +     + +r++lg+f t+eeA +a+++ r+++e
  WALNUT_00007957-RA 123 SKYRGVRQRK-WGKWAAEIRDpF-----KgARIWLGTFNTPEEASEAYEKKRLEFE 172
                         89*******9.**********55.....45***********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-12123172IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-17123174IPR016177DNA-binding domain
SMARTSM003803.6E-19124188IPR001471AP2/ERF domain
CDDcd000189.49E-24124171No hitNo description
Gene3DG3DSA:3.30.730.109.9E-23124176IPR001471AP2/ERF domain
PROSITE profilePS5103220.389124182IPR001471AP2/ERF domain
PRINTSPR003674.5E-10125136IPR001471AP2/ERF domain
PRINTSPR003674.5E-10147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTQSRRRVPN QKICKKSNKA IAPVMESGMM MRKVRIICSD PYATDSSSSE DESVKCNKRA  60
KKAKQLVREI HIPMVLQPSL KSLQTESSCQ DSNNGGRTTN TIKAGTKRVL AKTPSSSRRP  120
SSSKYRGVRQ RKWGKWAAEI RDPFKGARIW LGTFNTPEEA SEAYEKKRLE FESAMAANAN  180
SEKSKNKAAV SSAAVSQSQN NHNLGSSGDS ESVLSQTSPS SVPESETSAS NTNVKNVSSS  240
VKEGVETNSE IDLAALDLPD DLGLIGDLFG DIPFGQTEFD SLCFDNIGQF FDDFEVCGIE  300
KNGGSELPNW DFADIGDDMG WMNEPLNKIP CQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-14125176355ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018859774.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2I4HUF20.0A0A2I4HUF2_JUGRE; ethylene-responsive transcription factor ERF118-like
STRINGXP_008243412.13e-76(Prunus mume)
STRINGXP_008368213.16e-76(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.29e-30ERF family protein