 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
WALNUT_00007079-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
|
| Family |
B3 |
| Protein Properties |
Length: 332aa MW: 38171.4 Da PI: 9.7429 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| WALNUT_00007079-RA | genome | JHU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 56 | 7.4e-18 | 41 | 134 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
ffk+++ps + +++ l++p kf++ +g + ++ +tl ++g sW+v l + +++++ +GW +Fv+ + +++g f+vF+++g+s+f
WALNUT_00007079-RA 41 FFKIMLPSAMAQKK-LRIPVKFVRLFGDE--LPTVVTLILPNGCSWQVGLERATGEKEIWFHEGWHDFVEYHSIDSGYFLVFRYEGNSNF- 127
99***999999998.********888755..8999***************77677777****************************9999. PP
.EEEEE-S CS
B3 92 lvvkvfrk 99
+v vf+k
WALNUT_00007079-RA 128 -HVLVFDK 134
.****998 PP
|
| 2 | B3 | 56.6 | 4.8e-18 | 233 | 327 | 7 | 98 |
.-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS..-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 7 psdvlksgrlvlpkkfaeeh.ggkkeesktltledesg..rsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91
p ++++ r+++p fa+++ +++ +s++l+ de+ r+W v ++ ++k++ l++GWk F+++n+LkegD +vF+l++r+ +
WALNUT_00007079-RA 233 PRSSGS-YRMYVPSGFATSYlSLN--QSVKLQTSDEDDgqREWHVICRChhNRKPRLsLKLGSGWKVFARDNNLKEGDACVFELVQRKPTV 320
444444.57***********7666..77777777766689*******7766444333699***************************9999 PP
.EEEEE- CS
B3 92 lvvkvfr 98
l+v++fr
WALNUT_00007079-RA 321 LKVSIFR 327
*****98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MCMAAAGNIS KNRRSGMFPN WKNDHHRRPS SSVAGRRPAH FFKIMLPSAM AQKKLRIPVK 60
FVRLFGDELP TVVTLILPNG CSWQVGLERA TGEKEIWFHE GWHDFVEYHS IDSGYFLVFR 120
YEGNSNFHVL VFDKTATEIQ YSSKNLDDDH MIMLSDDDVE KSSHDDKSKE TRAIILSKHE 180
DGETSDHDRE RPVVLSGTST KERSLRMSRG RERAIQAAIT FKPKNPSFMR IMPRSSGSYR 240
MYVPSGFATS YLSLNQSVKL QTSDEDDGQR EWHVICRCHH NRKPRLSLKL GSGWKVFARD 300
NNLKEGDACV FELVQRKPTV LKVSIFRVVD YV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 4i1k_A | 1e-23 | 211 | 332 | 32 | 146 | B3 domain-containing transcription factor VRN1 |
| 4i1k_B | 1e-23 | 211 | 332 | 32 | 146 | B3 domain-containing transcription factor VRN1 |
| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_018849672.1 | 0.0 | PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 |
| TrEMBL | A0A2I4H0K3 | 0.0 | A0A2I4H0K3_JUGRE; B3 domain-containing transcription factor VRN1-like isoform X1 |
