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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00006393-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | ERF | ||||||||
Protein Properties | Length: 308aa MW: 35495.7 Da PI: 4.498 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.2 | 3.1e-16 | 119 | 168 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 s ykGVr++k g++vAeIrdp + r+r +lg+++taeeAa a+ r ++e WALNUT_00006393-RA 119 SLYKGVRRRK-YGKYVAEIRDPLQ---RRRLWLGTYDTAEEAAVAYQIKRVEIE 168 57*****999.8*********844...5******************99888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.31E-15 | 119 | 167 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 3.27E-21 | 119 | 160 | No hit | No description |
SMART | SM00380 | 9.5E-16 | 120 | 179 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.6E-20 | 120 | 163 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.767 | 120 | 177 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.9E-9 | 120 | 161 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.5E-8 | 121 | 132 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.5E-8 | 143 | 159 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MPDLKNHYLI LDNNYQKLRR KINETNFMPM KRIRITYHDP YATDSSSDDE EEYEFKKDES 60 MGIKRFVREI SLPDFQYDDY SCAETSPQNN SDESKGKIST STRINAKVFN DKKVLRSSSL 120 YKGVRRRKYG KYVAEIRDPL QRRRLWLGTY DTAEEAAVAY QIKRVEIERL QLLVKNEMNS 180 LSTDHPSPSS VLDVSASALL GCGTESPIKE EGNAEPLLEG EESVLALSEV PVVRPLESPQ 240 ELKLGCYSYD CSLFGDDFIG DFNCRNDMDF YPEYEVEHDL ACDLPYLDID FAKQDFSWID 300 ETLNVACP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 127 | KGVRRRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018830012.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A2I4FEE4 | 0.0 | A0A2I4FEE4_JUGRE; ethylene-responsive transcription factor ERF118-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13451 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 6e-22 | ERF family protein |