PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00002080-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 660aa    MW: 71986.1 Da    PI: 8.7322
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00002080-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87.2e-31300357260
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                         dDgynWrKYGqK vkg efprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  WALNUT_00002080-RA 300 DDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 357
                         8****************************************.***************85 PP
2WRKY1062e-33474532159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  WALNUT_00002080-RA 474 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 532
                         59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-27293358IPR003657WRKY domain
PROSITE profilePS5081122.768294358IPR003657WRKY domain
SuperFamilySSF1182901.57E-24296358IPR003657WRKY domain
SMARTSM007744.9E-33299357IPR003657WRKY domain
PfamPF031068.7E-24300356IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-37459534IPR003657WRKY domain
SuperFamilySSF1182902.75E-29466534IPR003657WRKY domain
PROSITE profilePS5081138.825469534IPR003657WRKY domain
SMARTSM007743.1E-39474533IPR003657WRKY domain
PfamPF031064.1E-26475532IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MTHRNRHRHR HRERSIVTSQ PRLTLSLSSL TNFTHTHTIA SKLPFCPSLL PFHTIKATLL  60
RSLPTLPSQS LEMSQTQTSS LSQFRLSSSG DLAPGNADDS GHPGSNSAKY KLMSPAKLPI  120
SRSACITIPP GLSPTSFLES PVLLSNMKAE PSPTTGSFMK PQVIHGPASS AAHPGTTVCS  180
NTDSFNERNP SFFEFKPHAT SNMVPADLNH HRNEQSIQVQ GQCHPHAFAS SASVKNEMAV  240
SSNELSLSAP IHMVTSGASA PAEVDSGELN HRGTPNTGFQ ASQSESKGGG ISAVAERPSD  300
DGYNWRKYGQ KLVKGCEFPR SYYKCTHPNC EVKKLFERSH DGQITEIIYK GTHDHPKPQP  360
SRRYTSGTMM TVQEERSDKA PSLTGRDEKS GIYGQTSHAV EPNGTPDLSP VMANDDSLDG  420
AGSTPNRNND DVEDDDLFSK RRKMDIGGLD VTPVVKPIRE PRVVVQTLSE VDILDDGYRW  480
RKYGQKVVRG NPNPRSYYKC TNAGCPVRKH VERASHDPKA VITTYEGKHN HDVPTARTSS  540
HDTAGHTTVS GPSRIIRSEE SDTISLDLGV GISSAVENRS NEPRQAHHSE ILGVQSHASN  600
SNFKVFQATP VSAYFGVLST GLSRYGSREN PSEGRKIEIP PLNHSSYPFP QNMGKILTGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-36300534877Probable WRKY transcription factor 4
2lex_A1e-36300534877Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1313RNRHRHRHRER
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018824903.10.0PREDICTED: probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV00.0WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A2I4EZS90.0A0A2I4EZS9_JUGRE; probable WRKY transcription factor 20 isoform X1
STRINGEMJ158680.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein