PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

WALNUT_00000558-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

NZZ/SPL

Protein Properties

Length: 454aa MW: 50124.4 Da PI: 8.7815

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00000558-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	21.2	4.7e-07	61	114	53	106
NOZZLE 53 qqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpv 106 + kqkk rg+gva+le+ ++ee++kk v+a +sv+ + lp+p WALNUT_00000558-RA 61 NPKQKKAPQRGLGVAQLEKIRLEEQQKKDVAAILSPPASVSQRESSFLSLPIPT 114 45899999***********************99999999998888888888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence Send to blast
MTDIRPTKHI NAPPPETDNL DWNVLTIIWK RTRMDKADQT QRYNNSGSGG GIGGVARSSK 60 NPKQKKAPQR GLGVAQLEKI RLEEQQKKDV AAILSPPASV SQRESSFLSL PIPTYHHSNP 120 SSCSIPFPSP SLPDLSSRDL LIRPPQPGQN NDEKNSSTVN SAGFEAGWLG ISVPGLGCVP 180 KLRNSHEYNL EKENSGMDPR LAFRSNLNLP YESDNHIWPP PSLMPKTQQY QQQPMVNVSS 240 GTSSSSVLNF RMEPPSNQSY YCNYSPMWPP EEVKMVGTKR LYPFSLDNSS GPSSHYKLPS 300 LVVPVRSDES ASCENVGMFN FEGSNSILRG RPSWSTSISN SNLNSNKSIK ENEVIKGEFL 360 SLSPRITSTC PSSKFMQHSA CLASQDPRFR DESLPYQGIV EDPIIKPAGS SLLNQQPPFY 420 YFLPPAKEQI GKATTTMNNC NGGVGERIDL NLKL

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence Send to blast

MTDIRPTKHI NAPPPETDNL DWNVLTIIWK RTRMDKADQT QRYNNSGSGG GIGGVARSSK  60
NPKQKKAPQR GLGVAQLEKI RLEEQQKKDV AAILSPPASV SQRESSFLSL PIPTYHHSNP  120
SSCSIPFPSP SLPDLSSRDL LIRPPQPGQN NDEKNSSTVN SAGFEAGWLG ISVPGLGCVP  180
KLRNSHEYNL EKENSGMDPR LAFRSNLNLP YESDNHIWPP PSLMPKTQQY QQQPMVNVSS  240
GTSSSSVLNF RMEPPSNQSY YCNYSPMWPP EEVKMVGTKR LYPFSLDNSS GPSSHYKLPS  300
LVVPVRSDES ASCENVGMFN FEGSNSILRG RPSWSTSISN SNLNSNKSIK ENEVIKGEFL  360
SLSPRITSTC PSSKFMQHSA CLASQDPRFR DESLPYQGIV EDPIIKPAGS SLLNQQPPFY  420
YFLPPAKEQI GKATTTMNNC NGGVGERIDL NLKL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018850011.1	0.0	PREDICTED: uncharacterized protein LOC109012693
Refseq	XP_018850020.1	0.0	PREDICTED: uncharacterized protein LOC109012693
Refseq	XP_018850027.1	0.0	PREDICTED: uncharacterized protein LOC109012693
TrEMBL	A0A2I4H1G9	0.0	A0A2I4H1G9_JUGRE; uncharacterized protein LOC109012693
STRING	EMJ12826	6e-99	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27330.1	1e-06	sporocyteless (SPL)