PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

Vun011871

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

MYB_related

Protein Properties

Length: 118aa MW: 13930 Da PI: 9.4488

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-13882	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.7	4.2e-11	5	44	1	35
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgR 35 +++WT++E++ l+ +v+++G+g Wk I + + + R Vun011871 5 KQKWTQDEEDALIAGVEKHGPGKWKNILKDPQfapflTSR 44 79*************************9987766555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.328	1	59	IPR017930	Myb domain
SuperFamily	SSF46689	7.55E-13	2	59	IPR009057	Homeodomain-like
SMART	SM00717	0.0023	4	57	IPR001005	SANT/Myb domain
Pfam	PF00249	1.1E-8	5	34	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	4.6E-12	5	50	IPR009057	Homeodomain-like
CDD	cd11660	1.14E-13	6	50	No hit	No description
Gene3D	G3DSA:2.60.120.10	5.0E-7	87	117	IPR014710	RmlC-like jelly roll fold
Pfam	PF05899	1.3E-7	89	116	IPR008579	Domain of unknown function DUF861, cupin-3
SuperFamily	SSF46689	7.55E-13	92	105	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence Send to blast
MGNQKQKWTQ DEEDALIAGV EKHGPGKWKN ILKDPQFAPF LTSRSNIDLK VQKYTKRLDG 60 FFNSIFQQSL RGHDLSLIWC DTHLMHNRWG CPLGKFPWSY EEKETYYLVE GKVKVWVK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A4D6NBT5	8e-57	A0A4D6NBT5_VIGUN; Myb proto-oncogene protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17520.1	3e-22	MYB_related family protein