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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vun011038 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
bHLH |
| Protein Properties |
Length: 166aa MW: 18246 Da PI: 7.674 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-167a-Vigna_unguiculata-31821 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 11.4 | 0.0006 | 10 | 28 | 36 | 54 |
S-STCHHHHHHHHHHHHHH CS
HLH 36 kKlsKaeiLekAveYIksL 54
K++Ka+ L A+ YI++L
Vun011038 10 SKMDKASLLGDAISYINEL 28
69***************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 166 aa
Download sequence Send
to blast |
ALRAVFPNVS KMDKASLLGD AISYINELKS KLSELESEKG ELEKQLDSVK KELELSTKNP 60
SPPSPPRGPS PSNKEAKETT SKLIDLEVEV KIIGWDAMIR IQCSKKNHPA ARLMAALKDL 120
DLDVHHASVS VVNDLMIQQA TVNMGNRFYT QEQLLSALSS KIGHAL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5gnj_A | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_B | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_E | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_F | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_G | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_I | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_M | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| 5gnj_N | 2e-17 | 1 | 53 | 26 | 78 | Transcription factor MYC2 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-AACGTG-3') found in a number of promoters of jasmonate-induced genes (PubMed:15231736). Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:30518626). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). Acts synergistically with EOT1 in the transactivation of TPS5 (PubMed:24884371). Involved in type VI glandular trichome development (PubMed:30518626). Involved in the activation of terpene synthases required for volatile mono- and sesquiterpenes synthesis by the glandular cells of type VI trichomes (PubMed:30518626). {ECO:0000269|PubMed:15231736, ECO:0000269|PubMed:24884371, ECO:0000269|PubMed:30518626}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by methyl jasmonate and wounding. {ECO:0000269|PubMed:15231736}. |
