PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010147
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family DBB
Protein Properties Length: 203aa    MW: 22447.7 Da    PI: 8.0586
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45816168PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.23e-071747434
   zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeH 34
               + C+ +e+  ++ fC  ++  lC+ C  + H
  Vun010147 17 TLCDACESAAAIVFCAADEAALCRACDKKVH 47
               57*************************9998 PP
2zf-B_box31.24.4e-1066106238
   zf-B_box   2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 
                + ++C+ +e+ ++ ++Ce++++ lC +C +  H g    H+
  Vun010147  66 DVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGgkrtHE 106
                5799**************************99966666776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.8261461IPR000315B-box-type zinc finger
SMARTSM003363.8E-91461IPR000315B-box-type zinc finger
CDDcd000215.60E-61759No hitNo description
PfamPF006431.2E-51755IPR000315B-box-type zinc finger
SuperFamilySSF578459.39E-662101No hitNo description
PROSITE profilePS501199.52765110IPR000315B-box-type zinc finger
SMARTSM003361.2E-1165110IPR000315B-box-type zinc finger
PfamPF006435.5E-866106IPR000315B-box-type zinc finger
CDDcd000213.77E-868107No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
ENNTPSNSKP STSIMRTLCD ACESAAAIVF CAADEAALCR ACDKKVHMCN KLASRHVRVG  60
LASPSDVPRC DICENAPAFF YCETDGSSLC LQCDMIVHVG GKRTHERYLL FRQRVEFPGD  120
KPGKSENPAS QPLDPGETKR GQNALPKIKM GEKQQNHRMP LILTPEPNAD EHAMMGTKMI  180
DLNMKPQRIH EPTSNNQVRM PGK
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014509204.11e-149B-box zinc finger protein 18 isoform X1
SwissprotC0SVM52e-74BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A4D6KYC11e-150A0A4D6KYC1_VIGUN; Zinc finger protein CONSTANS
STRINGXP_007156118.11e-138(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.11e-76DBB family protein