PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Publication

Basic Information? help Back to Top

TF ID

Vun009345

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bHLH

Protein Properties

Length: 233aa MW: 25895.4 Da PI: 7.0334

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-19186	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.4e-10	81	128	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 a+ rE+ RRd++N++f eL ++l + + +K +K++iL A + + +L Vun009345 81 AKACREKMRRDKLNDRFLELSSILEPG---RPPKTDKVAILSDAARVVVQL 128 6778********************8...89*********99876665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.017	77	128	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	6.4E-8	81	128	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.00E-7	81	133	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.5E-12	83	150	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.3E-8	83	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.45E-13	83	153	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence Send to blast
MDMNSSSGAS GWLYDYGFDI PVAGADFMVA ADSGGFSWGP QNHTLKGPSH TSLEMEYSLD 60 STVLENSPSK RLRTESCASG AKACREKMRR DKLNDRFLEL SSILEPGRPP KTDKVAILSD 120 AARVVVQLRN ETERLKEMND ELQGKVKELK AEKNELRDEK NMLKDEKEKL EQQVKLTNIH 180 NSFVPQAQAA KGQVGSHKLI PFIWLSWNLL CGSLCPPAAV DTSKDHLLRP PVA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027930151.1	1e-160	transcription factor bHLH115-like
Swissprot	Q9C682	1e-58	BH115_ARATH; Transcription factor bHLH115
TrEMBL	A0A4D6N753	1e-155	A0A4D6N753_VIGUN; Myc-type
STRING	XP_007149945.1	1e-143	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51070.1	5e-61	bHLH family protein

Publications ? help Back to Top
Liang G,Zhang H,Li X,Ai Q,Yu D bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana. J. Exp. Bot., 2017. 68(7): p. 1743-1755 [PMID:28369511]