PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008202
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 281aa    MW: 33065.8 Da    PI: 6.9122
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-5223PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.26.6e-16115189286
   trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                Wt++e laL+++r++me+++ +       We+vs+k++e g++rs+++Ckek+e+ ++++ +  +  k++     ++++++++le
  Vun008202 115 WTNDELLALLRIRSSMESWFPEL-----TWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYGKNN-----NNYRFLSELE 189
                ********************987.....9*******************************8765555542.....3566766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-11113191No hitNo description
PROSITE profilePS500906.481114166IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
RKEEVKKREV STQNTNTNMF DGVPDQFHQF ITPRTSLPLH LPFPLHASGT PNTTFPSNFD  60
PYNPHQLPLQ PNTLLHPFPP HKDEHHKDQN NTVPMNFQIQ RDQRHQQLPQ LIDPWTNDEL  120
LALLRIRSSM ESWFPELTWE HVSRKLAELG YKRSAEKCKE KFEEESRYFN NNINYGKNNN  180
NYRFLSELEQ LYHQGGADHL GTQEKTQQHK QDKMDHHPLE EGDSGKLEAP VTKQTHDVDD  240
DAAAEKNQGR KRKRPGRFEM FKGFCESIVH KMMAQQEEMH N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027937305.10.0trihelix transcription factor GTL2-like
TrEMBLA0A4D6N2B40.0A0A4D6N2B4_VIGUN; Uncharacterized protein
STRINGXP_007144820.11e-139(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.11e-26Trihelix family protein