PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun005748
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ZF-HD
Protein Properties Length: 174aa    MW: 18578.7 Da    PI: 7.9986
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45939511PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-15308PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.95.1e-3366123359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                  +v+YkeClkNh aslGgha+DGCgEfmps+ ++  +++++kCaACgCHRnFHRre+ee
    Vun005748  66 AVVYKECLKNHVASLGGHALDGCGEFMPSPAATaDDPSSIKCAACGCHRNFHRREPEE 123
                  689**************************9999889******************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047705.7E-2867121IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.5469120IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015664.6E-3069120IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257741.0E-2169120IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MEIITPTPPP TAVTPTNAAP KSPELDIETP TRIHQAAGNS NPSPKPVSFS NGVLKRHHAN  60
NRAAAAVVYK ECLKNHVASL GGHALDGCGE FMPSPAATAD DPSSIKCAAC GCHRNFHRRE  120
PEEPPISPAT HHVLEYQPHH RHHPLPPPPH RSPNSSSPPP ISSYPSAPQM LLAX
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027923571.11e-121zinc-finger homeodomain protein 9
SwissprotQ9LXG01e-37ZHD8_ARATH; Zinc-finger homeodomain protein 8
TrEMBLA0A4D6LXI41e-120A0A4D6LXI4_VIGUN; Uncharacterized protein
STRINGXP_007151228.14e-79(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.13e-33homeobox protein 34
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]