PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Basic Information? help Back to Top

TF ID

Vun005081

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

FAR1

Protein Properties

Length: 199aa MW: 23010.2 Da PI: 8.3262

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45936405	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-13213	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.1	1.9e-25	43	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYAk+ GF vr ++ ++s+ +++i++r+f C+k+g++ + ++kt+ +++r++ r gC+a++ vk +k gkw+vtk+++eH+H l+ Vun005081 43 NFYDEYAKHEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVNKFGKWVVTKFVKEHSHLLN 132 6*****************************************9999*************************************885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.0E-22	43	132	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
MDLEAVAETV VNSTDQISAA LEGNSIGEPN VGMEFESEEA AKNFYDEYAK HEGFVVRLDR 60 CHRSEVDNRI ISRRFSCNKQ GFHVRVRNKT KPVHKPRTSI REGCEAMMLV KVNKFGKWVV 120 TKFVKEHSHL LNASGSPSYS KMIESKDRII QQLTKELEYR DRLCQQYRRQ LFSLLETVEE 180 QTESLSKNVE LVVNNIKNL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027907007.1	1e-146	protein FAR1-RELATED SEQUENCE 12-like isoform X1
Refseq	XP_027907008.1	1e-146	protein FAR1-RELATED SEQUENCE 12-like isoform X2
TrEMBL	A0A0S3SWK0	1e-139	A0A0S3SWK0_PHAAN; Uncharacterized protein
STRING	XP_007134265.1	1e-137	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-55	FAR1 family protein