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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Vun004583 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
NAC |
| Protein Properties |
Length: 218aa MW: 24626.2 Da PI: 9.2606 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Vun#S45831660 | PU_unref | Unigene | View CDS |
| PUT-167a-Vigna_unguiculata-19956 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 81.2 | 2.2e-25 | 28 | 153 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99
lp+G+rF+Ptd l +yL+k+++g++l+ i + d++++ePw+Lp k + + +fF + + ++ ++r + +g W+ kd+ev +++l
Vun004583 28 LPVGYRFDPTDPVLAGYYLTKRLRGHPLPN-GLILDYDVHQTEPWELPGGGKFMNWQKFFFYNVKGLNP----EKRDAGKGQWEMVEKDEEVEFYDEQLa 122
799************************999.89***************543333335588877766654....6888999************98766556 PP
NAM 100 ..vglkktLvfykgrapkgektdWvmheyrl 128
+ k +Lvf+k + ++ kt+Wvmhe+rl
Vun004583 123 plTAKKSVLVFWKSKGNSLAKTKWVMHEFRL 153
76888999*********************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
GSLQSQKVFG VASLMEVFNP VEGKTYKLPV GYRFDPTDPV LAGYYLTKRL RGHPLPNGLI 60
LDYDVHQTEP WELPGGGKFM NWQKFFFYNV KGLNPEKRDA GKGQWEMVEK DEEVEFYDEQ 120
LAPLTAKKSV LVFWKSKGNS LAKTKWVMHE FRLALKSNPS KMSAMGVCRI FERKTSKRAK 180
RARVSTEGVS NAEEAMEVID FTVECGTETS PPPPPGTP
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 6e-16 | 28 | 176 | 17 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 6e-16 | 28 | 176 | 17 | 168 | NAC domain-containing protein 19 |
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